BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A04SP1|AL425619
(746 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1436 0.0
>3x_Contig1530
Length = 6216
Score = 1436 bits (721), Expect = 0.0
Identities = 736/744 (98%)
Strand = Plus / Minus
Query: 3 tcagacagccgcataaaccaattatccgaatgaactgttcctctcgtactaagttcaatt 62
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5105 tcagacagccgcaaaaaccaattatccgaatgaactgttcctctcgtactaagttcaatt 5046
Query: 63 actattgcgataacattcatcagtagggtaaaactaacctgtctcacgacggtctaaacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5045 actattgcgataacattcatcagtagggtaaaactaacctgtctcacgacggtctaaacc 4986
Query: 123 cagctcacgttccctattagtgggtgaacaatccaacgcttaccgaattctgcttcggta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4985 cagctcacgttccctattagtgggtgaacaatccaacgcttaccgaattctgcttcggta 4926
Query: 183 tgataggdagagccgacatcgaagaatcaaaaagcaatgtcgctatgaacgcttgactgc 242
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4925 tgataggaagagccgacatcgaagaatcaaaaagcaatgtcgctatgaacgcttgactgc 4866
Query: 243 cacaagccagttatccctgtggtaacttttctggcacctctagcctcaaattccgaggac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4865 cacaagccagttatccctgtggtaacttttctggcacctctagcctcaaattccgaggac 4806
Query: 303 ctaaaggatcgataggccacactttcatggtttgtattcacactgaaaatcaaaatcaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4805 ctaaaggatcgataggccacactttcatggtttgtattcacactgaaaatcaaaatcaag 4746
Query: 363 gggacttttacccttttgttctactggagatttctgttctccatgagtyccccttaggac 422
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4745 gggacttttacccttttgttctactggagatttctgttctccatgagtcccccttaggac 4686
Query: 423 atctgcgttatcgtttaacagatgtgccgccccagccaaactccccacctgacaatgtct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4685 atctgcgttatcgtttaacagatgtgccgccccagccaaactccccacctgacaatgtct 4626
Query: 483 tcaacccggatcagcccgtataggactttgaatgctagaacgtggaaaatgaattccagc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4625 tcaacccggatcagcccgtataggactttgaatgctagaacgtggaaaatgaattccagc 4566
Query: 543 tccgcttaattgaataagttaagawactataaaggtagtggtatttcactggcgccgaag 602
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 4565 tccgcttaattgaataagtaaagaaactataaaggtagtggtatttcactggcgccgaag 4506
Query: 603 ctcccacttatgctacaccctctatgtctcttcacaatgtcaaactagagttaagctcaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4505 ctcccacttatgctacaccctctatgtctcttcacaatgtcaaactagagtcaagctcaa 4446
Query: 663 cagggtcttctttccccgctgnttctgccaagcccgttcccttggctgtggtttcgctag 722
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4445 cagggtcttctttccccgctgattctgccaagcccgttcccttggctgtggtttcgctag 4386
Query: 723 atagtagatagggamagtgggaat 746
|||||||||||||| |||||||||
Sbjct: 4385 atagtagatagggacagtgggaat 4362
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3410
Number of Sequences: 1807
Number of extensions: 3410
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 746
length of database: 10,358,551
effective HSP length: 16
effective length of query: 730
effective length of database: 10,329,639
effective search space: 7540636470
effective search space used: 7540636470
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)